Estimators

We provide here an example of scikit-dimension estimators performances on two different proteins, villin and NTL9.

The test is performed on dihedral angles and data is divided between folded and unfolded trajectories.

Villin

Because of the huge gap between folded replicas, in the previous plot we omitted KNN, which is shown below instead.

NTL9

Because of the huge gap between folded replicas, in the previous plot we omitted KNN, which is shown below instead.

As the result obtained on the two proteins is similar, we suggest not to use KNN for this kind of study.